Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdlim3O70209 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim3O70209 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.29■□□□□ 0.2
Pdlim3O70209 Gm43017-201ENSMUST00000198296 752 ntBASIC16.29■□□□□ 0.2
Pdlim3O70209 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pdlim3O70209 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim3O70209 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pdlim3O70209 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Gm43060-201ENSMUST00000200621 289 ntBASIC16.28■□□□□ 0.2
Pdlim3O70209 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Pdlim3O70209 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pdlim3O70209 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim3O70209 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Gm13146-201ENSMUST00000118508 780 ntBASIC16.27■□□□□ 0.2
Pdlim3O70209 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.27■□□□□ 0.2
Pdlim3O70209 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.27■□□□□ 0.2
Pdlim3O70209 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim3O70209 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pdlim3O70209 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
Pdlim3O70209 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim3O70209 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pdlim3O70209 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.27■□□□□ 0.19
Pdlim3O70209 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Pdlim3O70209 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.27■□□□□ 0.19
Pdlim3O70209 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.27■□□□□ 0.19
Pdlim3O70209 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.26■□□□□ 0.19
Pdlim3O70209 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pdlim3O70209 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.26■□□□□ 0.19
Pdlim3O70209 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pdlim3O70209 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.26■□□□□ 0.19
Pdlim3O70209 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pdlim3O70209 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.25■□□□□ 0.19
Pdlim3O70209 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.25■□□□□ 0.19
Pdlim3O70209 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pdlim3O70209 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pdlim3O70209 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms