Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cldn5O54942 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn5O54942 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Cldn5O54942 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.62■□□□□ 0.57
Cldn5O54942 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.62■□□□□ 0.57
Cldn5O54942 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn5O54942 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.62■□□□□ 0.57
Cldn5O54942 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Cldn5O54942 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Cldn5O54942 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.62■□□□□ 0.57
Cldn5O54942 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cldn5O54942 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.61■□□□□ 0.57
Cldn5O54942 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.61■□□□□ 0.57
Cldn5O54942 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.61■□□□□ 0.57
Cldn5O54942 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.61■□□□□ 0.57
Cldn5O54942 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.61■□□□□ 0.57
Cldn5O54942 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cldn5O54942 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn5O54942 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
Cldn5O54942 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.6■□□□□ 0.57
Cldn5O54942 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn5O54942 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.59■□□□□ 0.57
Cldn5O54942 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.59■□□□□ 0.57
Cldn5O54942 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Cldn5O54942 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.59■□□□□ 0.57
Cldn5O54942 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Cldn5O54942 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cldn5O54942 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn5O54942 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn5O54942 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.58■□□□□ 0.57
Cldn5O54942 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.58■□□□□ 0.57
Cldn5O54942 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn5O54942 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn5O54942 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn5O54942 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn5O54942 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.58■□□□□ 0.56
Cldn5O54942 Gm12382-201ENSMUST00000122005 922 ntBASIC18.58■□□□□ 0.56
Cldn5O54942 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.58■□□□□ 0.56
Cldn5O54942 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.58■□□□□ 0.56
Cldn5O54942 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.58■□□□□ 0.56
Cldn5O54942 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.58■□□□□ 0.56
Cldn5O54942 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn5O54942 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn5O54942 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.57■□□□□ 0.56
Cldn5O54942 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Cldn5O54942 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn5O54942 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn5O54942 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn5O54942 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms