Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.28■□□□□ 0.68
Nr1i3O35627 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.28■□□□□ 0.68
Nr1i3O35627 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Nr1i3O35627 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Nr1i3O35627 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.28■□□□□ 0.68
Nr1i3O35627 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nr1i3O35627 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nr1i3O35627 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nr1i3O35627 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nr1i3O35627 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Nr1i3O35627 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nr1i3O35627 Gm38285-201ENSMUST00000192928 922 ntBASIC19.27■□□□□ 0.68
Nr1i3O35627 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nr1i3O35627 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nr1i3O35627 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Nr1i3O35627 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Nr1i3O35627 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nr1i3O35627 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
Nr1i3O35627 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nr1i3O35627 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Nr1i3O35627 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Nr1i3O35627 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Nr1i3O35627 Gm18284-201ENSMUST00000172604 624 ntBASIC19.25■□□□□ 0.67
Nr1i3O35627 Gm7291-201ENSMUST00000199147 382 ntBASIC19.25■□□□□ 0.67
Nr1i3O35627 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Nr1i3O35627 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.25■□□□□ 0.67
Nr1i3O35627 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nr1i3O35627 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nr1i3O35627 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1i3O35627 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nr1i3O35627 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Nr1i3O35627 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1i3O35627 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1i3O35627 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Nr1i3O35627 Gm6211-202ENSMUST00000167849 925 ntBASIC19.24■□□□□ 0.67
Nr1i3O35627 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1i3O35627 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nr1i3O35627 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.24■□□□□ 0.67
Nr1i3O35627 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Nr1i3O35627 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.23■□□□□ 0.67
Nr1i3O35627 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
Nr1i3O35627 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.23■□□□□ 0.67
Nr1i3O35627 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.23■□□□□ 0.67
Nr1i3O35627 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.23■□□□□ 0.67
Nr1i3O35627 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.23■□□□□ 0.67
Nr1i3O35627 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nr1i3O35627 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Nr1i3O35627 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.22■□□□□ 0.67
Nr1i3O35627 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nr1i3O35627 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms