Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cx3cl1O35188 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cx3cl1O35188 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cx3cl1O35188 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cx3cl1O35188 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cx3cl1O35188 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cx3cl1O35188 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.83■□□□□ 0.29
Cx3cl1O35188 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cx3cl1O35188 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Gm27275-201ENSMUST00000184318 272 ntBASIC16.83■□□□□ 0.28
Cx3cl1O35188 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.83■□□□□ 0.28
Cx3cl1O35188 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cx3cl1O35188 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Gm20760-201ENSMUST00000179197 648 ntBASIC16.82■□□□□ 0.28
Cx3cl1O35188 Trmt13-210ENSMUST00000198454 880 ntBASIC16.82■□□□□ 0.28
Cx3cl1O35188 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Zfp783-201ENSMUST00000095946 670 ntBASIC16.82■□□□□ 0.28
Cx3cl1O35188 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.82■□□□□ 0.28
Cx3cl1O35188 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.82■□□□□ 0.28
Cx3cl1O35188 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.82■□□□□ 0.28
Cx3cl1O35188 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Gm11927-201ENSMUST00000118472 759 ntBASIC16.81■□□□□ 0.28
Cx3cl1O35188 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.81■□□□□ 0.28
Cx3cl1O35188 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cx3cl1O35188 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.8■□□□□ 0.28
Cx3cl1O35188 Gm11249-201ENSMUST00000117071 859 ntBASIC16.8■□□□□ 0.28
Cx3cl1O35188 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cx3cl1O35188 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.8■□□□□ 0.28
Cx3cl1O35188 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cx3cl1O35188 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cx3cl1O35188 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.78■□□□□ 0.28
Cx3cl1O35188 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cx3cl1O35188 Gm38285-201ENSMUST00000192928 922 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms