Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm6365-201ENSMUST00000054711 744 ntBASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf11bO08712 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Gm8969-201ENSMUST00000199694 526 ntBASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf11bO08712 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Gm18284-201ENSMUST00000172604 624 ntBASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Gm26571-201ENSMUST00000181399 666 ntBASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tnfrsf11bO08712 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tnfrsf11bO08712 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Tnfrsf11bO08712 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Tnfrsf11bO08712 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Gm10849-201ENSMUST00000100397 618 ntBASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf11bO08712 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf11bO08712 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf11bO08712 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Gm7291-201ENSMUST00000199147 382 ntBASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf11bO08712 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms