Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp35M0QWN7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Gm6576-201ENSMUST00000169678 883 ntBASIC19.21■□□□□ 0.67
Usp35M0QWN7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.21■□□□□ 0.67
Usp35M0QWN7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp35M0QWN7 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Usp35M0QWN7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.2■□□□□ 0.66
Usp35M0QWN7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.2■□□□□ 0.66
Usp35M0QWN7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.19■□□□□ 0.66
Usp35M0QWN7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.19■□□□□ 0.66
Usp35M0QWN7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.19■□□□□ 0.66
Usp35M0QWN7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.19■□□□□ 0.66
Usp35M0QWN7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp35M0QWN7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.18■□□□□ 0.66
Usp35M0QWN7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Usp35M0QWN7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Gm7977-201ENSMUST00000193787 748 ntBASIC19.17■□□□□ 0.66
Usp35M0QWN7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.17■□□□□ 0.66
Usp35M0QWN7 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.17■□□□□ 0.66
Usp35M0QWN7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp35M0QWN7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.16■□□□□ 0.66
Usp35M0QWN7 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Usp35M0QWN7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms