Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
B020004C17RikJ3QP07 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
B020004C17RikJ3QP07 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
B020004C17RikJ3QP07 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
B020004C17RikJ3QP07 Notumos-201ENSMUST00000151998 2659 ntBASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
B020004C17RikJ3QP07 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Gm21559-201ENSMUST00000220638 855 ntBASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Gm8587-201ENSMUST00000076538 843 ntBASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
B020004C17RikJ3QP07 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Gm27389-201ENSMUST00000183622 195 ntBASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Mir1668-201ENSMUST00000184114 107 ntBASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
B020004C17RikJ3QP07 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Gm7284-201ENSMUST00000131667 944 ntBASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Gm5587-201ENSMUST00000206270 674 ntBASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Gm7370-201ENSMUST00000219471 767 ntBASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
B020004C17RikJ3QP07 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Gm13401-201ENSMUST00000117074 291 ntBASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Gm9013-201ENSMUST00000132939 882 ntBASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
B020004C17RikJ3QP07 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
B020004C17RikJ3QP07 BC021767-201ENSMUST00000126387 1716 ntBASIC20.07■□□□□ 0.8
B020004C17RikJ3QP07 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
B020004C17RikJ3QP07 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
B020004C17RikJ3QP07 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
B020004C17RikJ3QP07 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
B020004C17RikJ3QP07 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms