Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Colca2F8VPY8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.1■□□□□ 0.33
Colca2F8VPY8 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.1■□□□□ 0.33
Colca2F8VPY8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Colca2F8VPY8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Gm11355-201ENSMUST00000121120 306 ntBASIC17.09■□□□□ 0.33
Colca2F8VPY8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.09■□□□□ 0.33
Colca2F8VPY8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Colca2F8VPY8 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Colca2F8VPY8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Colca2F8VPY8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Colca2F8VPY8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
Colca2F8VPY8 Gm44771-201ENSMUST00000206975 626 ntBASIC17.08■□□□□ 0.32
Colca2F8VPY8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Colca2F8VPY8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Colca2F8VPY8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Colca2F8VPY8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Gm18958-201ENSMUST00000174258 762 ntBASIC17.07■□□□□ 0.32
Colca2F8VPY8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.07■□□□□ 0.32
Colca2F8VPY8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Colca2F8VPY8 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Gm13401-201ENSMUST00000117074 291 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 Gm27357-201ENSMUST00000183754 135 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.06■□□□□ 0.32
Colca2F8VPY8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.06■□□□□ 0.32
Colca2F8VPY8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Colca2F8VPY8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.05■□□□□ 0.32
Colca2F8VPY8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.05■□□□□ 0.32
Colca2F8VPY8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Colca2F8VPY8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms