Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Rps4l-201ENSMUST00000071745 943 ntBASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Mir2861-201ENSMUST00000175539 82 ntBASIC16.19■□□□□ 0.18
Sptbn4E9PX29 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Sptbn4E9PX29 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm5364-201ENSMUST00000216789 889 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm23935-201ENSMUST00000102303 57 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm24270-201ENSMUST00000102326 57 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm24245-201ENSMUST00000157318 57 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm2756-201ENSMUST00000195851 400 ntBASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sptbn4E9PX29 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Gm10576-201ENSMUST00000191927 825 ntBASIC16.17■□□□□ 0.18
Sptbn4E9PX29 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Gm7213-201ENSMUST00000215977 950 ntBASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sptbn4E9PX29 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.16■□□□□ 0.18
Sptbn4E9PX29 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sptbn4E9PX29 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sptbn4E9PX29 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sptbn4E9PX29 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.14■□□□□ 0.17
Sptbn4E9PX29 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms