Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ptchd4B9EKX1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.3■□□□□ 0.68
Ptchd4B9EKX1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Gm12085-201ENSMUST00000119263 940 ntBASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ptchd4B9EKX1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Tgds-204ENSMUST00000228543 1594 ntBASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ptchd4B9EKX1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ptchd4B9EKX1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ptchd4B9EKX1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ptchd4B9EKX1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ptchd4B9EKX1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ptchd4B9EKX1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Gm38027-201ENSMUST00000192315 235 ntBASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Gm4974-201ENSMUST00000209974 875 ntBASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Ptchd4B9EKX1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms