Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Usp42B2RQC2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Gm15375-201ENSMUST00000119510 849 ntBASIC21.02■□□□□ 0.95
Usp42B2RQC2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Gm20760-201ENSMUST00000179197 648 ntBASIC21.02■□□□□ 0.95
Usp42B2RQC2 Gm27011-201ENSMUST00000182352 972 ntBASIC21.02■□□□□ 0.95
Usp42B2RQC2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.02■□□□□ 0.95
Usp42B2RQC2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Usp42B2RQC2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.01■□□□□ 0.95
Usp42B2RQC2 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.01■□□□□ 0.95
Usp42B2RQC2 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.01■□□□□ 0.95
Usp42B2RQC2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Mir6349-201ENSMUST00000184059 97 ntBASIC21.01■□□□□ 0.95
Usp42B2RQC2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Usp42B2RQC2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Idnk-204ENSMUST00000226010 1898 ntBASIC21■□□□□ 0.95
Usp42B2RQC2 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Usp42B2RQC2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21■□□□□ 0.95
Usp42B2RQC2 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Usp42B2RQC2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21■□□□□ 0.95
Usp42B2RQC2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.99■□□□□ 0.95
Usp42B2RQC2 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Gm5643-201ENSMUST00000117081 966 ntBASIC20.99■□□□□ 0.95
Usp42B2RQC2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Gm18666-201ENSMUST00000190039 958 ntBASIC20.99■□□□□ 0.95
Usp42B2RQC2 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.99■□□□□ 0.95
Usp42B2RQC2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Usp42B2RQC2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.98■□□□□ 0.95
Usp42B2RQC2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Usp42B2RQC2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.97■□□□□ 0.95
Usp42B2RQC2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Usp42B2RQC2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Usp42B2RQC2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Usp42B2RQC2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms