Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Gm6736-201ENSMUST00000166583 948 ntBASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Gm37722-201ENSMUST00000193757 208 ntBASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Shroom2A2ALU4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Shroom2A2ALU4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Gm11779-201ENSMUST00000118541 368 ntBASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Shroom2A2ALU4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Rps4l-201ENSMUST00000071745 943 ntBASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Shroom2A2ALU4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shroom2A2ALU4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Shroom2A2ALU4 Gm26039-201ENSMUST00000158152 144 ntBASIC28.52■■■□□ 2.16
Shroom2A2ALU4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Shroom2A2ALU4 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Shroom2A2ALU4 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC28.51■■■□□ 2.15
Shroom2A2ALU4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC28.5■■■□□ 2.15
Shroom2A2ALU4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC28.49■■■□□ 2.15
Shroom2A2ALU4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC28.49■■■□□ 2.15
Shroom2A2ALU4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC28.49■■■□□ 2.15
Shroom2A2ALU4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Shroom2A2ALU4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Shroom2A2ALU4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 Gm13042-201ENSMUST00000119244 1955 ntBASIC28.48■■■□□ 2.15
Shroom2A2ALU4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Shroom2A2ALU4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC28.47■■■□□ 2.15
Shroom2A2ALU4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm3272-201ENSMUST00000181181 1229 ntBASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm2756-201ENSMUST00000195851 400 ntBASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm10566-201ENSMUST00000086739 996 ntBASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Shroom2A2ALU4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Shroom2A2ALU4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Shroom2A2ALU4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms