Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.57■□□□□ 0.4
Gm28729A0A1B0GSW2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm28729A0A1B0GSW2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm28729A0A1B0GSW2 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Gm28729A0A1B0GSW2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Gm28729A0A1B0GSW2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Gm6659-201ENSMUST00000174752 547 ntBASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Gm28729A0A1B0GSW2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.52■□□□□ 0.39
Gm28729A0A1B0GSW2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
Gm28729A0A1B0GSW2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Gm38027-201ENSMUST00000192315 235 ntBASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Gm28729A0A1B0GSW2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Gm28729A0A1B0GSW2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms