Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Gm37179-201ENSMUST00000194862 823 ntBASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbv17A0A140T8P8 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbv17A0A140T8P8 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Mir5133-201ENSMUST00000174955 77 ntBASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Gm10602-201ENSMUST00000098239 609 ntBASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trbv17A0A140T8P8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Gm7290-201ENSMUST00000104990 617 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Gm12918-201ENSMUST00000120234 636 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Gm15710-201ENSMUST00000121821 636 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Gm5075-201ENSMUST00000196916 622 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbv17A0A140T8P8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.73□□□□□ -0.21
Trbv17A0A140T8P8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbv17A0A140T8P8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms