Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm10812-201ENSMUST00000099864 546 ntBASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav13n-4A0A0G2JG01 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm13534-201ENSMUST00000121169 513 ntBASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm20049-201ENSMUST00000219950 730 ntBASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Fst-202ENSMUST00000223640 2612 ntBASIC14.54□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav13n-4A0A0G2JG01 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trav13n-4A0A0G2JG01 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Gm10252-201ENSMUST00000209541 832 ntBASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav13n-4A0A0G2JG01 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav13n-4A0A0G2JG01 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms