Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav9-4A0A0B4J1K2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm5953-201ENSMUST00000220644 2616 ntBASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm2559-201ENSMUST00000201323 363 ntBASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav9-4A0A0B4J1K2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm12896-201ENSMUST00000118430 226 ntBASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav9-4A0A0B4J1K2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-4A0A0B4J1K2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.46□□□□□ -0.26
Trav9-4A0A0B4J1K2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-4A0A0B4J1K2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav9-4A0A0B4J1K2 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav9-4A0A0B4J1K2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 Tgds-204ENSMUST00000228543 1594 ntBASIC13.44□□□□□ -0.26
Trav9-4A0A0B4J1K2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms