Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh7A0A0A6YY83 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh7A0A0A6YY83 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh7A0A0A6YY83 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh7A0A0A6YY83 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.49■□□□□ 0.55
Pcdh7A0A0A6YY83 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh7A0A0A6YY83 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm10418-201ENSMUST00000100943 576 ntBASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm11249-201ENSMUST00000117071 859 ntBASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
Pcdh7A0A0A6YY83 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Mir2861-201ENSMUST00000175539 82 ntBASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Gm10138-203ENSMUST00000206952 366 ntBASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdh7A0A0A6YY83 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh7A0A0A6YY83 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdh7A0A0A6YY83 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Mir6349-201ENSMUST00000184059 97 ntBASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Mtag2-201ENSMUST00000058665 714 ntBASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh7A0A0A6YY83 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh7A0A0A6YY83 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh7A0A0A6YY83 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh7A0A0A6YY83 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh7A0A0A6YY83 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pcdh7A0A0A6YY83 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms