Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Flg-201ENSMUST00000050758 1488 ntBASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Gm12441-201ENSMUST00000121806 588 ntBASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Gm29257-201ENSMUST00000186115 639 ntBASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav6-4A0A075B6B4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Gm2559-201ENSMUST00000201323 363 ntBASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav6-4A0A075B6B4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav6-4A0A075B6B4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav6-4A0A075B6B4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Tgds-204ENSMUST00000228543 1594 ntBASIC13.79□□□□□ -0.2
Trav6-4A0A075B6B4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms