Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6n-6A0A075B6B2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6n-6A0A075B6B2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6n-6A0A075B6B2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6n-6A0A075B6B2 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Gm8969-201ENSMUST00000199694 526 ntBASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav6n-6A0A075B6B2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6n-6A0A075B6B2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms