Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav17A0A075B655 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.28□□□□□ -0.12
Trav17A0A075B655 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav17A0A075B655 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav17A0A075B655 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Gm40848-201ENSMUST00000221998 324 ntBASIC14.27□□□□□ -0.13
Trav17A0A075B655 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav17A0A075B655 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.26□□□□□ -0.13
Trav17A0A075B655 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Gm13241-201ENSMUST00000094493 780 ntBASIC14.26□□□□□ -0.13
Trav17A0A075B655 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav17A0A075B655 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Gm26833-201ENSMUST00000180899 440 ntBASIC14.25□□□□□ -0.13
Trav17A0A075B655 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav17A0A075B655 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.24□□□□□ -0.13
Trav17A0A075B655 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav17A0A075B655 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms