Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12-3A0A075B648 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12-3A0A075B648 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Gm13216-201ENSMUST00000117145 591 ntBASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Gm10399-202ENSMUST00000202768 748 ntBASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Gm27045-201ENSMUST00000182145 1402 ntBASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tgds-204ENSMUST00000228543 1594 ntBASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12-3A0A075B648 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12-3A0A075B648 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-3A0A075B648 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-3A0A075B648 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav12-3A0A075B648 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Serp2-204ENSMUST00000228055 705 ntBASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav12-3A0A075B648 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms