Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav6n-5A0A075B621 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav6n-5A0A075B621 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav6n-5A0A075B621 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.9□□□□□ -0.19
Trav6n-5A0A075B621 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.19
Trav6n-5A0A075B621 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav6n-5A0A075B621 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav6n-5A0A075B621 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms