Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43060-201ENSMUST00000200621 289 ntBASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6-1A0A075B5Z8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav6-1A0A075B5Z8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43017-201ENSMUST00000198296 752 ntBASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.41□□□□□ -0.1
Trav6-1A0A075B5Z8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav6-1A0A075B5Z8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms