Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav1A0A075B5Z4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Gm26524-201ENSMUST00000192339 390 ntBASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Gm44549-201ENSMUST00000208351 577 ntBASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav1A0A075B5Z4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav1A0A075B5Z4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Trav1A0A075B5Z4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Gm13148-201ENSMUST00000118892 745 ntBASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Zfp783-201ENSMUST00000095946 670 ntBASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav1A0A075B5Z4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav1A0A075B5Z4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Gm27405-201ENSMUST00000184201 112 ntBASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trav1A0A075B5Z4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms