Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm11679-201ENSMUST00000121830 779 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm11879-201ENSMUST00000121885 702 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm20778-201ENSMUST00000178524 627 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm27004-201ENSMUST00000183300 727 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm37716-201ENSMUST00000193553 947 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm43269-201ENSMUST00000202075 518 ntTSL 3 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm44134-202ENSMUST00000204777 545 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm45082-201ENSMUST00000206082 601 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm10688-201ENSMUST00000214985 520 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm9088-201ENSMUST00000220237 508 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC161252.2-201ENSMUST00000224978 374 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC161383.1-201ENSMUST00000227356 527 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm25133-201ENSMUST00000082647 130 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Snora30-201ENSMUST00000083325 130 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm24029-201ENSMUST00000083928 143 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm43343-201ENSMUST00000202454 1926 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm26300-201ENSMUST00000102282 94 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Mir1903-201ENSMUST00000122574 80 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm29124-201ENSMUST00000186576 452 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm2367-201ENSMUST00000192374 472 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm31211-201ENSMUST00000199170 253 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm44809-201ENSMUST00000208305 993 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 AC165292.1-201ENSMUST00000215218 620 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm7570-201ENSMUST00000215246 698 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 AC154461.5-201ENSMUST00000225429 774 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Lima1Q9ERG0 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Lima1Q9ERG0 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms