Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm43105-201ENSMUST00000202987 459 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Zfp850-201ENSMUST00000099111 941 ntBASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Smc1aQ9CU62 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm44735-201ENSMUST00000206197 1752 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm7700-201ENSMUST00000120273 970 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm11852-201ENSMUST00000120806 222 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm14515-201ENSMUST00000121327 216 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm13593-201ENSMUST00000121329 692 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm7931-201ENSMUST00000121537 271 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm15237-201ENSMUST00000122104 469 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm24359-201ENSMUST00000158418 221 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm16164-201ENSMUST00000160078 468 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm22698-201ENSMUST00000175375 108 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm3650-201ENSMUST00000180600 747 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm27849-201ENSMUST00000183673 125 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm37203-201ENSMUST00000191618 385 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm7802-201ENSMUST00000216464 262 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.65□□□□□ -1.34
Smc1aQ9CU62 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Gm38137-201ENSMUST00000193735 1401 ntBASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Gm37238-201ENSMUST00000195552 2390 ntBASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.35
Smc1aQ9CU62 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm14356-201ENSMUST00000118322 869 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm13489-201ENSMUST00000121234 971 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm13430-201ENSMUST00000121366 288 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm9597-201ENSMUST00000171913 602 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm37376-201ENSMUST00000192176 453 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 AC157822.1-201ENSMUST00000196643 80 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm29778-201ENSMUST00000201667 466 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm10688-201ENSMUST00000214985 520 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 AC133650.1-201ENSMUST00000217243 578 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Zfp455-201ENSMUST00000117110 2556 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Smc1aQ9CU62 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms