Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm45610-201ENSMUST00000209227 784 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm17951-201ENSMUST00000198536 496 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm23511-201ENSMUST00000083084 164 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Tecta-203ENSMUST00000160940 7048 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm13740-201ENSMUST00000120590 310 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm29086-201ENSMUST00000186774 222 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm29085-201ENSMUST00000187108 225 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm5735-201ENSMUST00000207053 167 ntBASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdh23Q99PF4 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm17101-201ENSMUST00000169520 1588 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm37902-201ENSMUST00000192839 1683 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm43769-201ENSMUST00000201871 4323 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm12181-201ENSMUST00000121448 531 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm12732-201ENSMUST00000121688 180 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm9173-201ENSMUST00000198054 400 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm6362-201ENSMUST00000217686 836 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Cdh23Q99PF4 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.65□□□□□ -1.51
Cdh23Q99PF4 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Gm8458-201ENSMUST00000196658 819 ntBASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.65□□□□□ -1.51
Cdh23Q99PF4 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Tanc1-208ENSMUST00000139863 7246 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
Cdh23Q99PF4 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh23Q99PF4 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh23Q99PF4 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.64□□□□□ -1.51
Cdh23Q99PF4 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Cdh23Q99PF4 Gm28503-201ENSMUST00000185966 147 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms