Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm25342-201ENSMUST00000157459 122 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm24687-201ENSMUST00000157758 241 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm9529-201ENSMUST00000177598 579 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Mir7685-201ENSMUST00000183555 62 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm38330-201ENSMUST00000192743 959 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 BC049739-201ENSMUST00000202626 660 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm8703-201ENSMUST00000203793 730 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm45157-201ENSMUST00000208729 401 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 AC165292.1-201ENSMUST00000215218 620 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Vmn1r41-205ENSMUST00000227630 827 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 AC154563.1-201ENSMUST00000228317 442 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Olfr519-201ENSMUST00000084752 960 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.32□□□□□ -1.4
CopaQ8CIE6 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.32□□□□□ -1.4
CopaQ8CIE6 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm26146-201ENSMUST00000104478 185 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm12890-201ENSMUST00000120885 373 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm18833-201ENSMUST00000173218 862 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm27512-201ENSMUST00000175328 126 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm3489-201ENSMUST00000190083 528 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 AC154250.1-201ENSMUST00000224775 489 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm7108-201ENSMUST00000118038 3407 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.31□□□□□ -1.4
CopaQ8CIE6 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CopaQ8CIE6 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Olfr1246-204ENSMUST00000217254 5411 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.3□□□□□ -1.4
CopaQ8CIE6 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CopaQ8CIE6 Gm12937-201ENSMUST00000118333 448 ntBASIC6.3□□□□□ -1.4
CopaQ8CIE6 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms