Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm14783-201ENSMUST00000118900 663 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm7700-201ENSMUST00000120273 970 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm23050-201ENSMUST00000158775 165 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm26057-201ENSMUST00000178099 165 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm38330-201ENSMUST00000192743 959 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm44494-201ENSMUST00000196760 129 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm9038-201ENSMUST00000203400 604 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 AC158631.2-201ENSMUST00000219999 478 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm18592-201ENSMUST00000221529 276 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Gm36262-201ENSMUST00000223274 499 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Brf1Q8CFK2 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm17101-201ENSMUST00000169520 1588 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm23739-201ENSMUST00000102295 108 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm25345-201ENSMUST00000104505 133 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm14970-201ENSMUST00000122289 355 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Speer4cos-201ENSMUST00000162113 1083 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm28066-201ENSMUST00000188657 472 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm18444-201ENSMUST00000191239 629 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm43391-201ENSMUST00000196145 883 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm5990-201ENSMUST00000203126 746 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm44865-201ENSMUST00000207240 531 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm6702-201ENSMUST00000208496 471 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm18467-201ENSMUST00000208805 434 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 AC137871.3-201ENSMUST00000226628 225 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Olfr519-201ENSMUST00000084752 960 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm42671-201ENSMUST00000198013 1604 ntBASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Brf1Q8CFK2 Gm44723-201ENSMUST00000207369 4000 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm8750-201ENSMUST00000173278 1537 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 AC110043.1-201ENSMUST00000220278 1627 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm38284-201ENSMUST00000194803 4539 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm15781-201ENSMUST00000120216 323 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm24741-201ENSMUST00000158857 106 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm6140-201ENSMUST00000192494 966 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm6074-201ENSMUST00000193340 451 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm42886-201ENSMUST00000199214 466 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm43974-201ENSMUST00000205080 684 ntBASIC7.17□□□□□ -1.26
Brf1Q8CFK2 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC7.17□□□□□ -1.26
Brf1Q8CFK2 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms