Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Nup88Q8CEC0 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm11990-201ENSMUST00000121505 897 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm22724-201ENSMUST00000158091 127 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm38181-201ENSMUST00000181357 720 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Mir7008-201ENSMUST00000184398 63 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm37293-201ENSMUST00000191658 295 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm38131-201ENSMUST00000192449 430 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm37358-201ENSMUST00000195492 479 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm43467-201ENSMUST00000197441 437 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm18405-201ENSMUST00000220743 511 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 n-R5s65-201ENSMUST00000082614 117 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.91□□□□□ -1.3
Nup88Q8CEC0 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Nup88Q8CEC0 Gm38036-201ENSMUST00000194586 3564 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 CT025686.2-201ENSMUST00000227898 3315 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Ghr-202ENSMUST00000110697 1213 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm15840-201ENSMUST00000122099 943 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm25363-201ENSMUST00000158850 245 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm3650-201ENSMUST00000180600 747 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Mir6992-201ENSMUST00000183342 109 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm29592-201ENSMUST00000189434 370 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm8419-201ENSMUST00000189886 412 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm37756-201ENSMUST00000191834 942 ntTSL 3 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Trav3n-2-201ENSMUST00000197693 334 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm29736-201ENSMUST00000198189 385 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Trav3d-2-201ENSMUST00000199874 334 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm4742-201ENSMUST00000200261 771 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm5990-201ENSMUST00000203126 746 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm19182-201ENSMUST00000207139 577 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm6702-201ENSMUST00000208496 471 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Gm19116-201ENSMUST00000218592 642 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 AC124709.3-201ENSMUST00000227294 171 ntBASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Nup88Q8CEC0 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.9□□□□□ -1.31
Nup88Q8CEC0 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
Nup88Q8CEC0 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gp6-202ENSMUST00000206928 5900 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Mir290a-201ENSMUST00000104627 83 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.89□□□□□ -1.31
Nup88Q8CEC0 Gm13013-201ENSMUST00000119087 523 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms