Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Mirt2-201ENSMUST00000175179 285 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Mir3097-201ENSMUST00000175356 67 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm38181-201ENSMUST00000181357 720 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Mir7653-201ENSMUST00000184358 61 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm38131-201ENSMUST00000192449 430 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37375-201ENSMUST00000193859 387 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37774-201ENSMUST00000194401 245 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37385-201ENSMUST00000195223 387 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Mir6906-201ENSMUST00000198998 58 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm43798-201ENSMUST00000202056 394 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm44603-201ENSMUST00000206820 367 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5418-201ENSMUST00000206932 528 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm20586-201ENSMUST00000210122 547 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm28359-201ENSMUST00000187470 1322 ntBASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Sh3rf2Q8BZT2 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm22543-201ENSMUST00000104347 94 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm15018-201ENSMUST00000117090 633 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5073-201ENSMUST00000118222 820 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm15078-201ENSMUST00000118371 782 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm15331-201ENSMUST00000120225 385 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm22636-201ENSMUST00000158142 275 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm25363-201ENSMUST00000158850 245 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Mir5125-201ENSMUST00000175240 79 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm21399-201ENSMUST00000180210 597 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm8919-201ENSMUST00000182028 1014 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5430-201ENSMUST00000182525 915 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Mir7674-201ENSMUST00000184964 63 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm18547-201ENSMUST00000192439 811 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm38283-201ENSMUST00000193041 695 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm7890-201ENSMUST00000204877 601 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 AC164629.1-201ENSMUST00000220250 1113 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 AC162934.3-201ENSMUST00000223015 841 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 CU024892.1-201ENSMUST00000224869 515 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5229-201ENSMUST00000039375 354 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5830-201ENSMUST00000049117 443 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm5436-201ENSMUST00000058103 643 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm18880-201ENSMUST00000223333 1541 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Sh3rf2Q8BZT2 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms