Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm8324-201ENSMUST00000178911 1204 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm2871-201ENSMUST00000179984 1204 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm32158-201ENSMUST00000200135 404 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm6145-205ENSMUST00000211114 1148 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm18409-202ENSMUST00000220105 529 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm8613-201ENSMUST00000220383 1077 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 AC154616.2-201ENSMUST00000227978 398 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm42968-201ENSMUST00000198578 1372 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm16751-201ENSMUST00000142212 1685 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp40Q8BWR4 Gm44416-201ENSMUST00000204055 2066 ntBASIC8.3□□□□□ -1.08
Usp40Q8BWR4 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm42613-201ENSMUST00000199975 1931 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm24886-201ENSMUST00000104384 123 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm26143-201ENSMUST00000104480 108 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm14943-201ENSMUST00000118056 546 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm13506-201ENSMUST00000120391 1083 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm11446-201ENSMUST00000121319 866 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm22530-201ENSMUST00000158820 118 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm15970-201ENSMUST00000160623 834 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Mir3095-201ENSMUST00000175552 87 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm29588-201ENSMUST00000185738 298 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm5885-202ENSMUST00000203357 528 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm19065-202ENSMUST00000203910 1165 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 AC108846.4-201ENSMUST00000216783 341 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Mir331-201ENSMUST00000083673 96 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm37304-201ENSMUST00000193833 2886 ntBASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Usp40Q8BWR4 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm43503-201ENSMUST00000200033 3408 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm38284-201ENSMUST00000194803 4539 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm12583-201ENSMUST00000120677 853 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm11925-201ENSMUST00000121375 535 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Gm6808-201ENSMUST00000162341 807 ntBASIC8.28□□□□□ -1.08
Usp40Q8BWR4 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms