Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Nup98Q6PFD9 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm25422-201ENSMUST00000104219 129 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm4617-201ENSMUST00000178993 331 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Mir6994-201ENSMUST00000198985 73 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm10709-201ENSMUST00000213318 480 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm23686-201ENSMUST00000083241 164 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Mir188-201ENSMUST00000083464 68 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 AC139350.2-201ENSMUST00000226508 2331 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm14175-201ENSMUST00000119835 241 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 AC159886.1-201ENSMUST00000217099 1091 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Gm6049-201ENSMUST00000222369 458 ntBASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Nup98Q6PFD9 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
Nup98Q6PFD9 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Nup98Q6PFD9 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Nup98Q6PFD9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Nup98Q6PFD9 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Nup98Q6PFD9 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm14520-201ENSMUST00000119258 387 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm12267-201ENSMUST00000121609 761 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm24295-201ENSMUST00000158298 131 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm6872-201ENSMUST00000165001 700 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm20453-201ENSMUST00000173968 226 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Thoc7-209ENSMUST00000225325 765 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Nup98Q6PFD9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm12074-201ENSMUST00000120189 219 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm24103-201ENSMUST00000174930 77 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 AC192088.3-201ENSMUST00000227858 831 ntBASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Pigb-201ENSMUST00000093819 2866 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Nup98Q6PFD9 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms