Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Zfp638-201ENSMUST00000032088 6199 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
AtmQ62388 Gm12328-201ENSMUST00000118611 197 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm17847-201ENSMUST00000188261 1127 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm6051-201ENSMUST00000201529 352 ntBASIC5.32□□□□□ -1.56
AtmQ62388 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.32□□□□□ -1.56
AtmQ62388 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Kcnmb2-201ENSMUST00000119310 2600 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
AtmQ62388 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Gria1-202ENSMUST00000094179 5399 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm3267-201ENSMUST00000118671 473 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm5942-201ENSMUST00000120046 439 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Gm14679-201ENSMUST00000121536 722 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC5.32□□□□□ -1.56
AtmQ62388 Gm20480-201ENSMUST00000173953 250 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
AtmQ62388 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC5.32□□□□□ -1.56
AtmQ62388 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.32□□□□□ -1.56
AtmQ62388 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.32□□□□□ -1.56
AtmQ62388 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Mir193a-201ENSMUST00000083461 66 ntBASIC5.32□□□□□ -1.56
AtmQ62388 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
AtmQ62388 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
AtmQ62388 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.32□□□□□ -1.56
AtmQ62388 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC5.32□□□□□ -1.56
AtmQ62388 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Bach2-207ENSMUST00000171600 8493 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Gm6820-201ENSMUST00000188803 2173 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm8256-201ENSMUST00000169178 453 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm18717-201ENSMUST00000192744 1241 ntBASIC5.31□□□□□ -1.56
AtmQ62388 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm22741-201ENSMUST00000083438 165 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Mir346-201ENSMUST00000083547 98 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Zfp532-208ENSMUST00000182852 5476 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
AtmQ62388 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm15670-201ENSMUST00000117740 447 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Gm28503-201ENSMUST00000185966 147 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm8458-201ENSMUST00000196658 819 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm5735-201ENSMUST00000207053 167 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
AtmQ62388 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
AtmQ62388 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Cdh23-204ENSMUST00000105463 10991 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
AtmQ62388 Gm37926-201ENSMUST00000191922 2424 ntBASIC5.31□□□□□ -1.56
AtmQ62388 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
AtmQ62388 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms