Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm43328-201ENSMUST00000198544 1434 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm11845-201ENSMUST00000117886 327 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm11708-201ENSMUST00000119530 832 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm15311-201ENSMUST00000119682 282 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm15305-201ENSMUST00000120354 288 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm16139-201ENSMUST00000160015 420 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Mir5112-201ENSMUST00000174897 60 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm24080-201ENSMUST00000175178 232 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm25244-201ENSMUST00000178089 132 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm7426-201ENSMUST00000179046 404 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Mir7211-201ENSMUST00000184071 63 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm18775-201ENSMUST00000190763 586 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm43233-201ENSMUST00000200491 616 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 AC112274.2-201ENSMUST00000218436 170 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm6776-201ENSMUST00000057752 900 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm43523-201ENSMUST00000197397 2878 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm43059-201ENSMUST00000202437 1388 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Gm45322-201ENSMUST00000211642 1361 ntBASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp48Q3V0C5 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm37140-201ENSMUST00000192914 1684 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm38120-201ENSMUST00000195506 4642 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm9836-201ENSMUST00000117132 216 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm15659-201ENSMUST00000118881 341 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm11359-201ENSMUST00000120039 567 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm14898-201ENSMUST00000120202 645 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm14251-201ENSMUST00000122133 279 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm4613-201ENSMUST00000165488 276 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm18128-201ENSMUST00000172625 511 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm23186-201ENSMUST00000180078 107 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm36935-201ENSMUST00000192526 292 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm43345-201ENSMUST00000199484 269 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm7492-201ENSMUST00000201745 725 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm18205-201ENSMUST00000209215 841 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm6477-201ENSMUST00000217098 764 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm18586-201ENSMUST00000217265 518 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm18388-201ENSMUST00000222339 557 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 CT009711.4-201ENSMUST00000225685 198 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Gm9800-201ENSMUST00000052615 336 ntBASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp48Q3V0C5 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms