Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm13207-201ENSMUST00000119862 773 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm16511-201ENSMUST00000120019 564 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm26357-201ENSMUST00000158218 115 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm25904-201ENSMUST00000158491 143 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Mrgprb13-201ENSMUST00000188191 985 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm28639-201ENSMUST00000191519 481 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm37349-201ENSMUST00000194205 624 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm43476-201ENSMUST00000197873 405 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm43015-201ENSMUST00000199087 565 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm44277-201ENSMUST00000205128 649 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm18600-201ENSMUST00000207205 505 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 CT025685.1-201ENSMUST00000213716 150 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm5055-201ENSMUST00000215697 581 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 AC163631.1-201ENSMUST00000225041 598 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 AC154640.1-202ENSMUST00000227828 496 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm25810-201ENSMUST00000082752 108 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm6101-201ENSMUST00000195384 1867 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Gm44800-201ENSMUST00000207510 1855 ntBASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col8a1Q00780 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
Col8a1Q00780 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm9030-201ENSMUST00000218405 2410 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm9029-201ENSMUST00000219232 2410 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm45221-201ENSMUST00000207822 2272 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Mir466j-201ENSMUST00000116876 122 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm15110-201ENSMUST00000117545 881 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm15311-201ENSMUST00000119682 282 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm15305-201ENSMUST00000120354 288 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm11260-201ENSMUST00000121163 942 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm6568-201ENSMUST00000122274 697 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm14903-201ENSMUST00000122435 537 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Olfr331-202ENSMUST00000170501 957 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm27225-201ENSMUST00000183833 557 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm4874-201ENSMUST00000203589 691 ntBASIC5.8□□□□□ -1.48
Col8a1Q00780 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Col8a1Q00780 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms