Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm9027-201ENSMUST00000165914 661 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Gm29356-201ENSMUST00000186935 373 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm7266-201ENSMUST00000187999 405 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Trbv27-201ENSMUST00000193711 277 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm37196-201ENSMUST00000194762 906 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm37490-201ENSMUST00000195566 724 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm29745-201ENSMUST00000198005 687 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm6070-201ENSMUST00000207275 419 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC6.48□□□□□ -1.37
CiitaP79621 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Gm9472-201ENSMUST00000221625 526 ntBASIC6.48□□□□□ -1.37
CiitaP79621 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Mir375-201ENSMUST00000083682 64 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CiitaP79621 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Robo2-210ENSMUST00000226478 8059 ntBASIC6.48□□□□□ -1.37
CiitaP79621 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Zzz3-210ENSMUST00000200570 2491 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CiitaP79621 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CiitaP79621 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.47□□□□□ -1.37
CiitaP79621 Gm15078-201ENSMUST00000118371 782 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm8430-201ENSMUST00000119780 471 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm14515-201ENSMUST00000121327 216 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm12005-201ENSMUST00000121451 379 ntBASIC6.47□□□□□ -1.37
CiitaP79621 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC6.47□□□□□ -1.37
CiitaP79621 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm26106-201ENSMUST00000157254 228 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm23082-201ENSMUST00000157852 133 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm23030-201ENSMUST00000158004 273 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm23662-201ENSMUST00000158046 111 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm25445-201ENSMUST00000158996 299 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CiitaP79621 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.47□□□□□ -1.37
CiitaP79621 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.47□□□□□ -1.37
CiitaP79621 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CiitaP79621 Gm18350-201ENSMUST00000187395 955 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm29161-201ENSMUST00000188250 699 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm28066-201ENSMUST00000188657 472 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.47□□□□□ -1.37
CiitaP79621 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm37355-201ENSMUST00000193345 606 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm19060-201ENSMUST00000201959 421 ntBASIC6.47□□□□□ -1.37
CiitaP79621 1700019F05Rik-201ENSMUST00000202487 533 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm17994-201ENSMUST00000209260 533 ntBASIC6.47□□□□□ -1.37
CiitaP79621 AC105169.1-201ENSMUST00000218912 1294 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 AC132317.2-201ENSMUST00000227301 519 ntBASIC6.47□□□□□ -1.37
CiitaP79621 AC154283.1-201ENSMUST00000228417 389 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Mir143-201ENSMUST00000083511 63 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.47□□□□□ -1.37
CiitaP79621 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.47□□□□□ -1.37
CiitaP79621 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CiitaP79621 Gm15011-201ENSMUST00000117724 1480 ntBASIC6.47□□□□□ -1.37
CiitaP79621 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.47□□□□□ -1.37
CiitaP79621 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CiitaP79621 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CiitaP79621 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CiitaP79621 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.46□□□□□ -1.37
CiitaP79621 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CiitaP79621 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CiitaP79621 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC6.46□□□□□ -1.37
CiitaP79621 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.46□□□□□ -1.37
CiitaP79621 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.46□□□□□ -1.37
CiitaP79621 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.46□□□□□ -1.37
CiitaP79621 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
CiitaP79621 Olfr1214-203ENSMUST00000217469 1955 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CiitaP79621 Gm38126-201ENSMUST00000195297 4003 ntBASIC6.46□□□□□ -1.37
CiitaP79621 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CiitaP79621 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.46□□□□□ -1.38
CiitaP79621 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms