Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.79□□□□□ -1.48
Fdft1P53798 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Fdft1P53798 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.79□□□□□ -1.48
Fdft1P53798 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm24454-201ENSMUST00000083349 132 ntBASIC5.79□□□□□ -1.48
Fdft1P53798 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Fdft1P53798 Tmem209-204ENSMUST00000115160 3485 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Fdft1P53798 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.79□□□□□ -1.48
Fdft1P53798 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Fdft1P53798 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Fdft1P53798 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm24434-201ENSMUST00000104081 132 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC5.78□□□□□ -1.48
Fdft1P53798 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.78□□□□□ -1.48
Fdft1P53798 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm7952-201ENSMUST00000180540 984 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm44809-201ENSMUST00000208305 993 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Fdft1P53798 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Fdft1P53798 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Fdft1P53798 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Fdft1P53798 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.78□□□□□ -1.48
Fdft1P53798 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.78□□□□□ -1.48
Fdft1P53798 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.78□□□□□ -1.48
Fdft1P53798 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Fdft1P53798 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Fdft1P53798 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm22371-201ENSMUST00000104588 130 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Fdft1P53798 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm15840-201ENSMUST00000122099 943 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm25387-201ENSMUST00000157813 132 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm24733-201ENSMUST00000158863 253 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm27512-201ENSMUST00000175328 126 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm28934-201ENSMUST00000186491 346 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm18444-201ENSMUST00000191239 629 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm37430-201ENSMUST00000193039 196 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm43222-201ENSMUST00000199013 603 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm7181-201ENSMUST00000202197 434 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC5.77□□□□□ -1.49
Fdft1P53798 Gm5990-201ENSMUST00000203126 746 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm18851-201ENSMUST00000210087 1058 ntBASIC5.77□□□□□ -1.49
Fdft1P53798 Gm7802-201ENSMUST00000216464 262 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms