Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cux1P53564 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cux1P53564 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.92□□□□□ -0.98
Cux1P53564 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cux1P53564 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cux1P53564 Gm45633-201ENSMUST00000210669 3253 ntBASIC8.92□□□□□ -0.98
Cux1P53564 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC8.91□□□□□ -0.98
Cux1P53564 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cux1P53564 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cux1P53564 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm4989-201ENSMUST00000118711 749 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gm6175-201ENSMUST00000121351 400 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC8.91□□□□□ -0.98
Cux1P53564 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gm24103-201ENSMUST00000174930 77 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC8.91□□□□□ -0.98
Cux1P53564 Gm37336-202ENSMUST00000193705 468 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC8.91□□□□□ -0.98
Cux1P53564 Gm17775-201ENSMUST00000198542 258 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC8.91□□□□□ -0.98
Cux1P53564 Gm2011-203ENSMUST00000203750 435 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Gm5735-201ENSMUST00000207053 167 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cux1P53564 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cux1P53564 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cux1P53564 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Cux1P53564 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Abcc2-202ENSMUST00000099413 1926 ntBASIC8.91□□□□□ -0.98
Cux1P53564 LOC102637012-201ENSMUST00000217248 2562 ntBASIC8.91□□□□□ -0.98
Cux1P53564 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Cux1P53564 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Cux1P53564 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cux1P53564 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Gm22355-201ENSMUST00000175531 96 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Mir7087-201ENSMUST00000184840 70 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Gm43157-201ENSMUST00000198223 412 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm17994-201ENSMUST00000209260 533 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.9□□□□□ -0.98
Cux1P53564 CU024910.1-201ENSMUST00000214310 418 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm19169-201ENSMUST00000220109 1246 ntBASIC8.9□□□□□ -0.98
Cux1P53564 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm37553-201ENSMUST00000194135 1602 ntBASIC8.9□□□□□ -0.98
Cux1P53564 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.9□□□□□ -0.98
Cux1P53564 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Cux1P53564 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.98
Cux1P53564 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Cux1P53564 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.9□□□□□ -0.99
Cux1P53564 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
Cux1P53564 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm14472-201ENSMUST00000119815 282 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm26069-201ENSMUST00000157497 277 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm15838-201ENSMUST00000161575 180 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.99
Cux1P53564 Gm37631-201ENSMUST00000192275 364 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm37070-201ENSMUST00000193272 460 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Ighv1-35-201ENSMUST00000195265 351 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm31306-201ENSMUST00000197517 508 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm35648-201ENSMUST00000202304 475 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC8.9□□□□□ -0.99
Cux1P53564 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.9□□□□□ -0.99
Cux1P53564 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 Gm44255-201ENSMUST00000203456 2053 ntBASIC8.89□□□□□ -0.99
Cux1P53564 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.89□□□□□ -0.99
Cux1P53564 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Cux1P53564 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.89□□□□□ -0.99
Cux1P53564 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.89□□□□□ -0.99
Cux1P53564 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 AC154734.1-201ENSMUST00000219957 2141 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Mir193b-201ENSMUST00000103784 79 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Gm22273-201ENSMUST00000104040 132 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Cux1P53564 Gm11826-201ENSMUST00000118781 438 ntBASIC8.89□□□□□ -0.99
Cux1P53564 Gm15152-201ENSMUST00000121540 394 ntBASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms