Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm22952-201ENSMUST00000116720 120 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm12396-201ENSMUST00000121600 306 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Mettl4-ps1-201ENSMUST00000127676 1272 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr331-202ENSMUST00000170501 957 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm25246-201ENSMUST00000175476 69 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm27025-201ENSMUST00000182392 942 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm29513-201ENSMUST00000185741 202 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm29519-201ENSMUST00000186994 398 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm37758-201ENSMUST00000194275 629 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Ighv5-3-201ENSMUST00000195336 322 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm43501-201ENSMUST00000202513 107 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm19065-202ENSMUST00000203910 1165 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm19182-201ENSMUST00000207139 577 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm45379-201ENSMUST00000211772 549 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm45734-201ENSMUST00000211916 411 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm18405-201ENSMUST00000220743 511 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 AC098742.1-201ENSMUST00000227945 373 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Shmt1P50431 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr331-201ENSMUST00000081743 975 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Shmt1P50431 Mir365-2-201ENSMUST00000083555 112 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Gm25515-201ENSMUST00000083858 157 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
Shmt1P50431 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.56□□□□□ -1.36
Shmt1P50431 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.56□□□□□ -1.36
Shmt1P50431 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Shmt1P50431 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Shmt1P50431 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Shmt1P50431 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm25795-201ENSMUST00000104421 132 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm22371-201ENSMUST00000104588 130 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Mir290a-201ENSMUST00000104627 83 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm13771-201ENSMUST00000117988 238 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm14905-201ENSMUST00000122351 639 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm24179-201ENSMUST00000158925 127 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm18416-201ENSMUST00000175635 1003 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm15257-201ENSMUST00000177680 883 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm15252-201ENSMUST00000177750 883 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm15260-201ENSMUST00000179402 883 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 1700034K08Rik-202ENSMUST00000188082 619 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm43744-201ENSMUST00000196387 688 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm18747-201ENSMUST00000198129 648 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm44559-201ENSMUST00000207177 1012 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Gm44688-201ENSMUST00000209083 537 ntBASIC6.55□□□□□ -1.36
Shmt1P50431 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Shmt1P50431 Gm9292-201ENSMUST00000222008 710 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms