Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm45172-201ENSMUST00000206054 1301 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm12115-201ENSMUST00000119969 447 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Atf1-ps-201ENSMUST00000120608 810 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm27543-201ENSMUST00000183562 177 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Mir7087-201ENSMUST00000184840 70 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
Cxcl12P40224 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC6.1□□□□□ -1.43
Cxcl12P40224 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Agr3-201ENSMUST00000042101 826 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Gm8141-201ENSMUST00000190856 1723 ntBASIC6.1□□□□□ -1.43
Cxcl12P40224 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.1□□□□□ -1.43
Cxcl12P40224 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cxcl12P40224 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm43162-201ENSMUST00000198292 1770 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cxcl12P40224 n-R5s82-201ENSMUST00000104213 109 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm13681-201ENSMUST00000117925 210 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm11677-201ENSMUST00000121349 977 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm14679-201ENSMUST00000121536 722 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm28066-201ENSMUST00000188657 472 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm44219-201ENSMUST00000203005 273 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm20368-201ENSMUST00000220716 301 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm8412-201ENSMUST00000077493 440 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm24405-201ENSMUST00000083033 167 ntBASIC6.09□□□□□ -1.43
Cxcl12P40224 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cxcl12P40224 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cxcl12P40224 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Cxcl12P40224 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.09□□□□□ -1.44
Cxcl12P40224 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.09□□□□□ -1.44
Cxcl12P40224 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Cxcl12P40224 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cxcl12P40224 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.08□□□□□ -1.44
Cxcl12P40224 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.08□□□□□ -1.44
Cxcl12P40224 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.08□□□□□ -1.44
Cxcl12P40224 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC6.08□□□□□ -1.44
Cxcl12P40224 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.08□□□□□ -1.44
Cxcl12P40224 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cxcl12P40224 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Cxcl12P40224 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cxcl12P40224 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cxcl12P40224 Gm37082-201ENSMUST00000192629 1927 ntBASIC6.08□□□□□ -1.44
Cxcl12P40224 Gm6786-201ENSMUST00000203165 1915 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms