Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC6.96□□□□□ -1.3
Traf1P39428 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.96□□□□□ -1.3
Traf1P39428 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Mir5110-201ENSMUST00000175537 87 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 Gm28196-201ENSMUST00000187719 640 ntBASIC6.96□□□□□ -1.3
Traf1P39428 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC6.96□□□□□ -1.3
Traf1P39428 Gm7890-201ENSMUST00000204877 601 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Gm44539-201ENSMUST00000206010 238 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 AC140409.4-201ENSMUST00000215757 538 ntBASIC6.96□□□□□ -1.3
Traf1P39428 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.96□□□□□ -1.3
Traf1P39428 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.96□□□□□ -1.3
Traf1P39428 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.96□□□□□ -1.3
Traf1P39428 CT009734.1-201ENSMUST00000227657 1687 ntBASIC6.96□□□□□ -1.3
Traf1P39428 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Traf1P39428 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Traf1P39428 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.95□□□□□ -1.3
Traf1P39428 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Traf1P39428 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm15801-201ENSMUST00000120920 522 ntBASIC6.95□□□□□ -1.3
Traf1P39428 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.95□□□□□ -1.3
Traf1P39428 Gm16260-201ENSMUST00000155141 304 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm22210-201ENSMUST00000158101 144 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm8783-201ENSMUST00000159764 522 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
Traf1P39428 Mir3097-201ENSMUST00000175356 67 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Gm43946-201ENSMUST00000204058 886 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.95□□□□□ -1.3
Traf1P39428 Gm8290-201ENSMUST00000218202 477 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Traf1P39428 Gm5582-201ENSMUST00000075251 522 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Traf1P39428 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Traf1P39428 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Gm37100-201ENSMUST00000193344 1353 ntBASIC6.95□□□□□ -1.3
Traf1P39428 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Traf1P39428 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm8501-201ENSMUST00000117684 432 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Mup-ps16-201ENSMUST00000120085 596 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm11533-201ENSMUST00000120287 477 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm15194-201ENSMUST00000120453 434 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Gm25459-201ENSMUST00000157953 114 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm23149-201ENSMUST00000158837 230 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm7713-201ENSMUST00000181201 1007 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm27024-201ENSMUST00000182561 755 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm38131-201ENSMUST00000192449 430 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm37375-201ENSMUST00000193859 387 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm37385-201ENSMUST00000195223 387 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm43382-201ENSMUST00000198954 838 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm43798-201ENSMUST00000202056 394 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm19182-201ENSMUST00000207139 577 ntBASIC6.94□□□□□ -1.3
Traf1P39428 Gm46223-201ENSMUST00000215196 675 ntBASIC6.94□□□□□ -1.3
Traf1P39428 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.94□□□□□ -1.3
Traf1P39428 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Traf1P39428 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms