Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm15801-201ENSMUST00000120920 522 ntBASIC5.2□□□□□ -1.58
P20040 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.2□□□□□ -1.58
P20040 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC5.2□□□□□ -1.58
P20040 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm24435-201ENSMUST00000157886 110 ntBASIC5.2□□□□□ -1.58
P20040 Gm24733-201ENSMUST00000158863 253 ntBASIC5.2□□□□□ -1.58
P20040 Gm8783-201ENSMUST00000159764 522 ntBASIC5.2□□□□□ -1.58
P20040 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
P20040 Gm27762-201ENSMUST00000183417 109 ntBASIC5.2□□□□□ -1.58
P20040 Mir6921-201ENSMUST00000183719 80 ntBASIC5.2□□□□□ -1.58
P20040 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm28527-201ENSMUST00000185210 297 ntBASIC5.2□□□□□ -1.58
P20040 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm28996-201ENSMUST00000190316 721 ntBASIC5.2□□□□□ -1.58
P20040 Gm37430-201ENSMUST00000193039 196 ntBASIC5.2□□□□□ -1.58
P20040 Gm37784-201ENSMUST00000193233 189 ntBASIC5.2□□□□□ -1.58
P20040 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm44487-201ENSMUST00000205145 325 ntBASIC5.2□□□□□ -1.58
P20040 Gm5318-201ENSMUST00000205249 406 ntBASIC5.2□□□□□ -1.58
P20040 Gm19033-201ENSMUST00000208516 964 ntBASIC5.2□□□□□ -1.58
P20040 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 AC159246.1-201ENSMUST00000214478 249 ntBASIC5.2□□□□□ -1.58
P20040 Gm10688-201ENSMUST00000214985 520 ntBASIC5.2□□□□□ -1.58
P20040 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.2□□□□□ -1.58
P20040 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.2□□□□□ -1.58
P20040 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.2□□□□□ -1.58
P20040 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.2□□□□□ -1.58
P20040 AC137871.3-201ENSMUST00000226628 225 ntBASIC5.2□□□□□ -1.58
P20040 Gm8256-203ENSMUST00000228692 591 ntBASIC5.2□□□□□ -1.58
P20040 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Olfr794-201ENSMUST00000059957 963 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
P20040 Gm5582-201ENSMUST00000075251 522 ntBASIC5.2□□□□□ -1.58
P20040 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC5.2□□□□□ -1.58
P20040 Gm23686-201ENSMUST00000083241 164 ntBASIC5.2□□□□□ -1.58
P20040 Gm24454-201ENSMUST00000083349 132 ntBASIC5.2□□□□□ -1.58
P20040 Olfr519-201ENSMUST00000084752 960 ntBASIC5.2□□□□□ -1.58
P20040 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC5.2□□□□□ -1.58
P20040 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC5.2□□□□□ -1.58
P20040 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
P20040 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.2□□□□□ -1.58
P20040 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
P20040 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
P20040 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
P20040 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC5.2□□□□□ -1.58
P20040 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.19□□□□□ -1.58
P20040 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
P20040 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Gm42607-201ENSMUST00000200221 3393 ntBASIC5.19□□□□□ -1.58
P20040 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
P20040 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Gm14539-201ENSMUST00000117527 174 ntBASIC5.19□□□□□ -1.58
P20040 Gm15332-201ENSMUST00000118386 357 ntBASIC5.19□□□□□ -1.58
P20040 Gm15237-201ENSMUST00000122104 469 ntBASIC5.19□□□□□ -1.58
P20040 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.19□□□□□ -1.58
P20040 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
P20040 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.19□□□□□ -1.58
P20040 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.19□□□□□ -1.58
P20040 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.19□□□□□ -1.58
P20040 Gm27512-201ENSMUST00000175328 126 ntBASIC5.19□□□□□ -1.58
P20040 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.19□□□□□ -1.58
P20040 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.19□□□□□ -1.58
P20040 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.19□□□□□ -1.58
P20040 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.19□□□□□ -1.58
P20040 Gm27653-201ENSMUST00000185037 136 ntBASIC5.19□□□□□ -1.58
P20040 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.19□□□□□ -1.58
P20040 Gm28934-201ENSMUST00000186491 346 ntBASIC5.19□□□□□ -1.58
P20040 Gm18799-201ENSMUST00000189104 913 ntBASIC5.19□□□□□ -1.58
P20040 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC5.19□□□□□ -1.58
P20040 Gm6631-201ENSMUST00000193699 559 ntBASIC5.19□□□□□ -1.58
P20040 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC5.19□□□□□ -1.58
P20040 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
P20040 AC079644.3-201ENSMUST00000222452 357 ntBASIC5.19□□□□□ -1.58
P20040 Gm18247-201ENSMUST00000222937 601 ntBASIC5.19□□□□□ -1.58
P20040 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC5.19□□□□□ -1.58
P20040 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.19□□□□□ -1.58
P20040 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
P20040 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
P20040 Mir412-201ENSMUST00000083636 80 ntBASIC5.19□□□□□ -1.58
P20040 Olfr1143-201ENSMUST00000090708 945 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms