Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC157650.2-201ENSMUST00000224666 328 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Snora9-201ENSMUST00000082579 133 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm24319-201ENSMUST00000083389 107 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm20172-201ENSMUST00000193138 1551 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 AC162910.1-201ENSMUST00000221219 1723 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm37150-201ENSMUST00000193900 2754 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 Gm6823-201ENSMUST00000120791 1839 ntBASIC6.04□□□□□ -1.44
Hoxd3P09027 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Hoxd3P09027 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Hoxd3P09027 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Hoxd3P09027 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm37534-201ENSMUST00000194483 5222 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Patj-206ENSMUST00000107033 3624 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm45577-201ENSMUST00000210206 2287 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm22022-201ENSMUST00000104355 127 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm25565-201ENSMUST00000104605 105 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm9850-201ENSMUST00000117916 227 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm11813-201ENSMUST00000118586 291 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm15481-201ENSMUST00000120264 539 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm9225-201ENSMUST00000121921 836 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm11341-201ENSMUST00000122316 447 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Defb44-ps-201ENSMUST00000126871 219 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm24647-201ENSMUST00000157112 113 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm25184-201ENSMUST00000157753 163 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm16101-201ENSMUST00000160695 430 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm17022-201ENSMUST00000166415 922 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm4781-201ENSMUST00000167995 781 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Mir6541-201ENSMUST00000183649 110 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm27694-201ENSMUST00000184740 86 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm29273-201ENSMUST00000188880 262 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm37164-201ENSMUST00000192809 637 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm6510-201ENSMUST00000195916 574 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Tmem209-211ENSMUST00000222934 1212 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Hoxd3P09027 AC129537.1-202ENSMUST00000226619 430 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 CT573086.3-201ENSMUST00000228762 594 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hoxd3P09027 Gm36938-201ENSMUST00000191612 2696 ntBASIC6.03□□□□□ -1.44
Hoxd3P09027 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms