Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm26300-201ENSMUST00000102282 94 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm22661-201ENSMUST00000104192 132 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm8644-201ENSMUST00000118619 596 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm14584-201ENSMUST00000118956 637 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm6987-201ENSMUST00000119319 428 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm14831-201ENSMUST00000120253 409 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm13493-201ENSMUST00000120318 493 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm14065-201ENSMUST00000120848 585 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm12400-201ENSMUST00000120915 1003 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm12535-201ENSMUST00000121025 484 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm11679-201ENSMUST00000121830 779 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC4.67□□□□□ -1.66
Hmgb3O54879 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm6223-201ENSMUST00000178436 871 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm27186-201ENSMUST00000184223 307 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm27601-201ENSMUST00000184794 127 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm4322-201ENSMUST00000191094 336 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm31211-201ENSMUST00000199170 253 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm4602-201ENSMUST00000203198 308 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm44053-201ENSMUST00000203364 929 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm6681-201ENSMUST00000205215 607 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC4.67□□□□□ -1.66
Hmgb3O54879 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm6104-201ENSMUST00000078030 603 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Ceacam1-201ENSMUST00000098666 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm37553-201ENSMUST00000194135 1602 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Hmgb3O54879 Gm37890-201ENSMUST00000195610 3992 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 AC153532.2-201ENSMUST00000219753 3844 ntBASIC4.67□□□□□ -1.66
Hmgb3O54879 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Hmgb3O54879 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm25595-201ENSMUST00000102273 97 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm16073-201ENSMUST00000116032 517 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm6744-201ENSMUST00000119303 543 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm22119-201ENSMUST00000175594 99 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm5947-201ENSMUST00000179156 714 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm5645-201ENSMUST00000179597 714 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm29383-201ENSMUST00000188284 480 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm28080-201ENSMUST00000188552 722 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm21524-201ENSMUST00000190499 696 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm21715-201ENSMUST00000191056 694 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm43850-201ENSMUST00000202021 578 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Olfr1075-ps1-201ENSMUST00000214201 470 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm8863-201ENSMUST00000216630 926 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Hmgb3O54879 Gm31711-201ENSMUST00000220687 196 ntBASIC4.66□□□□□ -1.66
Hmgb3O54879 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms