Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm37531-201ENSMUST00000191628 5415 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm14116-201ENSMUST00000117733 805 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm13176-201ENSMUST00000117910 477 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm11445-201ENSMUST00000119101 532 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm12135-201ENSMUST00000119170 466 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm4914-201ENSMUST00000119757 459 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm8722-201ENSMUST00000121466 769 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Snora81-201ENSMUST00000157310 178 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm22818-201ENSMUST00000157446 104 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm24754-201ENSMUST00000177997 107 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm25244-201ENSMUST00000178089 132 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm27299-201ENSMUST00000184593 103 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm37191-201ENSMUST00000193346 388 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm37710-201ENSMUST00000193501 1274 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm17967-201ENSMUST00000195319 647 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm44300-201ENSMUST00000196792 121 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm9057-201ENSMUST00000198791 296 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm44374-201ENSMUST00000199821 140 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm9245-201ENSMUST00000200528 983 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm44023-201ENSMUST00000203710 469 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm45122-201ENSMUST00000206376 784 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm45405-201ENSMUST00000211544 609 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm8106-201ENSMUST00000213123 523 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 AL929265.1-201ENSMUST00000213427 125 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm18586-201ENSMUST00000217265 518 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 AC154484.1-201ENSMUST00000227311 771 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Carf-201ENSMUST00000027171 2102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm22043-201ENSMUST00000082993 158 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm42841-201ENSMUST00000199806 1932 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.36□□□□□ -1.39
Clip3B9EHT4 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Clip3B9EHT4 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clip3B9EHT4 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clip3B9EHT4 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Clip3B9EHT4 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clip3B9EHT4 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clip3B9EHT4 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clip3B9EHT4 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clip3B9EHT4 Gm37370-201ENSMUST00000191996 1410 ntBASIC6.35□□□□□ -1.39
Clip3B9EHT4 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms