Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm22273-201ENSMUST00000104040 132 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm14679-201ENSMUST00000121536 722 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm22993-201ENSMUST00000175423 254 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Mir6975-201ENSMUST00000184879 61 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm28429-201ENSMUST00000188521 363 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm37774-201ENSMUST00000194401 245 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gbp2-ps-201ENSMUST00000198870 1269 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm8999-201ENSMUST00000204951 969 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm18127-201ENSMUST00000208479 725 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm45777-201ENSMUST00000213009 301 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm40692-201ENSMUST00000220411 491 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 AC154576.1-202ENSMUST00000223966 3320 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm4989-201ENSMUST00000118711 749 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm29111-201ENSMUST00000188823 696 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm28584-201ENSMUST00000191489 696 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm38138-201ENSMUST00000193274 696 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm37991-201ENSMUST00000194297 696 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm19065-202ENSMUST00000203910 1165 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm44259-201ENSMUST00000204996 298 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm10764-202ENSMUST00000220397 2335 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Naip3-201ENSMUST00000118082 4208 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 AC158537.1-201ENSMUST00000224637 1711 ntBASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Col6a4A2AX52 Gm8750-201ENSMUST00000173278 1537 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 M6pr-ps-201ENSMUST00000120481 830 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm5430-201ENSMUST00000182525 915 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Mir6337-201ENSMUST00000184194 105 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm36999-201ENSMUST00000192756 1046 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm37689-201ENSMUST00000193139 275 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm9238-201ENSMUST00000196181 329 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 AC167222.2-201ENSMUST00000220014 295 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Vmn1r16-201ENSMUST00000227168 912 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 AC154406.1-201ENSMUST00000215220 2529 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Lrp2bp-203ENSMUST00000110381 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm12874-201ENSMUST00000117190 913 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm14755-201ENSMUST00000118037 384 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm13866-201ENSMUST00000118901 968 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm11825-201ENSMUST00000120710 736 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm7309-201ENSMUST00000121670 581 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm15970-201ENSMUST00000160623 834 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Vis1-201ENSMUST00000183957 201 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 Mir6362-201ENSMUST00000184329 107 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 AC096628.1-201ENSMUST00000226060 641 ntBASIC4.91□□□□□ -1.62
Col6a4A2AX52 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col6a4A2AX52 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms