Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.61□□□□□ -1.51
Trim3Q9R1R2 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm20826-202ENSMUST00000185348 4605 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm24434-201ENSMUST00000104081 132 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm12618-201ENSMUST00000121754 483 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm15257-201ENSMUST00000177680 883 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm15252-201ENSMUST00000177750 883 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm15256-201ENSMUST00000177793 883 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm15260-201ENSMUST00000179402 883 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm8919-201ENSMUST00000182028 1014 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm28975-201ENSMUST00000186412 686 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm17934-201ENSMUST00000192818 422 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm37838-201ENSMUST00000194464 312 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm43392-201ENSMUST00000196560 434 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm44162-201ENSMUST00000203543 544 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm45008-201ENSMUST00000206420 493 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm6009-201ENSMUST00000210848 280 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm3785-201ENSMUST00000221000 202 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm9237-201ENSMUST00000221499 548 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr519-201ENSMUST00000084752 960 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Slco6b1-202ENSMUST00000178359 1778 ntBASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim3Q9R1R2 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm35940-201ENSMUST00000213355 4797 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm10062-201ENSMUST00000072180 1470 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm37332-201ENSMUST00000195853 2844 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm27653-201ENSMUST00000185037 136 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm20561-201ENSMUST00000188131 292 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm29551-201ENSMUST00000190913 698 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm43655-201ENSMUST00000197367 222 ntBASIC5.59□□□□□ -1.51
Trim3Q9R1R2 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms