Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm22160-201ENSMUST00000158405 328 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm6223-201ENSMUST00000178436 871 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Stk-ps2-204ENSMUST00000187808 616 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm43762-201ENSMUST00000201521 295 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm8930-201ENSMUST00000201693 768 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Smarca2-231ENSMUST00000208091 1140 ntTSL 5 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm18205-201ENSMUST00000209215 841 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm3266-201ENSMUST00000217832 591 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm10095-201ENSMUST00000222765 483 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Gm24041-201ENSMUST00000083115 156 ntBASIC5.7□□□□□ -1.5
Lima1Q9ERG0 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.7□□□□□ -1.5
Lima1Q9ERG0 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 AC125095.1-201ENSMUST00000228387 2020 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Abcb7-201ENSMUST00000033695 5667 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm6744-201ENSMUST00000119303 543 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm13998-201ENSMUST00000120952 335 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Ighv5-3-201ENSMUST00000195336 322 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm10108-201ENSMUST00000078246 319 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm24200-201ENSMUST00000082955 157 ntBASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Lima1Q9ERG0 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm12388-201ENSMUST00000119112 1887 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm44750-201ENSMUST00000206185 2223 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC151971.5-201ENSMUST00000214422 3254 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm25795-201ENSMUST00000104421 132 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm22499-201ENSMUST00000104501 135 ntBASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Lima1Q9ERG0 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms