Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 AC116476.1-201ENSMUST00000226274 2318 ntBASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Rnft1Q9DCN7 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm15228-201ENSMUST00000142044 3440 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm2178-201ENSMUST00000104927 357 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm4342-201ENSMUST00000118982 367 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm14335-201ENSMUST00000119165 810 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm12287-201ENSMUST00000119770 707 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm14515-201ENSMUST00000121327 216 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm8550-201ENSMUST00000161621 653 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm23633-201ENSMUST00000175293 119 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Mir7033-201ENSMUST00000184259 81 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm42438-201ENSMUST00000197832 974 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm43295-201ENSMUST00000201439 412 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm6064-201ENSMUST00000203999 454 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm44212-201ENSMUST00000205016 897 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm44909-201ENSMUST00000208756 165 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm19170-201ENSMUST00000212440 1084 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm19056-201ENSMUST00000218220 797 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm3785-201ENSMUST00000221000 202 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 AC124426.1-203ENSMUST00000221814 1362 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Rnft1Q9DCN7 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm26377-201ENSMUST00000102184 108 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm25415-201ENSMUST00000104220 132 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm25564-201ENSMUST00000104604 132 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm22103-201ENSMUST00000116733 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm26475-201ENSMUST00000116769 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm23620-201ENSMUST00000116812 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm25042-201ENSMUST00000116856 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm25540-201ENSMUST00000116880 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm15901-201ENSMUST00000117663 941 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm11882-201ENSMUST00000121463 506 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm2976-201ENSMUST00000160362 513 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm17121-201ENSMUST00000170414 847 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm23550-201ENSMUST00000179003 121 ntBASIC6.12□□□□□ -1.43
Rnft1Q9DCN7 Gm25123-201ENSMUST00000179154 121 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms